Shopify QuickBooks Desktop Integration for Enterprise & Pro

Integrate Shopify with QuickBooks Desktop (Pro, Premier, and Enterprise) to automate accrual accounting and inventory sync. Automatically generate properly formatted sales receipts, refund receipts, and expense transactions while maintaining accurate inventory records for complete visibility into your ecommerce operations.

QuickBooks versions:
Desktop Pro, Desktop Premier, Desktop Enterprise
Compatible Shopify regions:
US, CA, UK, IE, SE, ES, NL, IT, DE, DK, BE, AT, AU, NZ, HK, SG, JP

Import details Automated Shopify Payments reconciliation

Reconcile Shopify payouts in minutes, not hours. Entriwise implements accrual accounting, recording sales when orders are shipped. Entriwise automatically posts Shopify Payments, PayPal, Stripe, and other payment transactions to separate dedicated balance accounts in QuickBooks Desktop Enterprise. This ensures that your clearing account balances in QuickBooks always reflect the actual funds held by your payment processors.
  • Post to dedicated balance accounts
  • Support for PayPal, Stripe, and others
  • Handle multi-currency transactions
Available in plans: Professional , Enterprise

Advanced tracking Track Shopify POS and Online separately

Separate your retail and e-commerce financials. Use QuickBooks Desktop Classes to track Shopify POS sales distinctly from your online store. Analyze profitability by sales channel and location to understand which parts of your business are performing best.
  • Separate reporting for POS vs. Online
  • Track sales by Shopify Location
  • Class-based profitability analysis
Available in plans: Professional , Enterprise

Advanced inventory Handle Shopify bundles and kits

Selling bundles on Shopify? Map a single Shopify product to a QuickBooks Desktop Group or Assembly item. Entriwise correctly deducts the component inventory in QuickBooks when a bundle is sold on Shopify, keeping your COGS accurate.
  • Map Shopify bundles to QB Groups
  • Correct component deduction
  • Support for dynamic bundles
Available in plans: Professional , Enterprise

Inventory sites Multi-location inventory management

Map your Shopify Locations to specific QuickBooks Inventory Sites. Entriwise ensures that orders are fulfilled from the correct warehouse and that inventory updates are sent to the right Shopify location, enabling true omnichannel inventory management.
  • Map Shopify Locations to QB Sites
  • Location-specific inventory sync
  • Support for 'Buy Online, Pick Up in Store'
Available in plans: Professional , Enterprise

Your numbers will be reconciled to the penny!

Our unique automatic reconciliation algorithm guarantees 100% correct imports. Whether you process 1,000 or 1,000,000 orders per month, Entriwise imports will reconcile to the penny.

Entriwise app screenshot
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Looking for something else? Talk to our in-house CPA and advisors

professionals who understand e-commerce needs.

Together we will find a solution that works exactly for your company, allows up and running quickly, with less disruption to your business.